PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN19070.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 184aa    MW: 21635.7 Da    PI: 4.6105
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN19070.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.80.000114080455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                ++ e ErrRR+++ s++  Lr+++           +Ka+i+e A+ YI +Lq
  KHN19070.1 40 KNLETERRRREKLSSRLLMLRSIM-----------NKAMIVEDAITYIEKLQ 80
                56689***************9987...........566************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.83E-83584No hitNo description
SuperFamilySSF474592.36E-113596IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-83599IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.6E-54285IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MEYEDEDWLC VTMDEFSLAT ENGCNRKRNF DDDTKEYKSK NLETERRRRE KLSSRLLMLR  60
SIMNKAMIVE DAITYIEKLQ DKVQSLSQEL HQMEATSEET AETKIVEIDA AEDMKNWGIQ  120
EEVIVEEINE NKLWVKIIVE KKRGRFSRLM EALNNFGIEL IDTNLTTTKG AFLITSFIKV  180
ILRL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14449ERRRRE
24550RRRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150384e-50AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003541764.11e-115PREDICTED: transcription factor DYT1-like
SwissprotO819007e-36DYT1_ARATH; Transcription factor DYT1
TrEMBLA0A0B2QCQ21e-130A0A0B2QCQ2_GLYSO; Transcription factor DYSFUNCTIONAL TAPETUM 1
STRINGGLYMA13G32370.21e-114(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55102948
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.18e-23bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]